Preface

Contents

Basic Prerequisite Skills

Computer needed for this course

Spark Environment Setup

Dev environment setup, task list

JDK setup

Download and install Anaconda Python and create virtual environment with Python 3.6

Download and install Spark

Eclipse, the Scala IDE

Install findspark, add spylon-kernel for scala

ssh and scp client

Summary

Development environment on MacOS

Production Spark Environment Setup

VirtualBox VM

VirtualBox only shows 32bit on AMD CPU

Configure VirtualBox NAT as Network Adapter on Guest VM and Allow putty ssh Through Port Forwarding

Docker deployment of Spark Cluster

Create customized Apache Spark Docker container

Dockerfile

docker-compose and docker-compose.yml

Launch custom built Docker container with docker-compose

Entering Docker Container

Setup Hadoop, Hive and Spark on Linux without docker

Hadoop Preparation

Hadoop setup

Configure $HADOOP_HOME/etc/hadoop

HDFS

Start and stop Hadoop

Work with Hadoop and HDFS file system

Connect to Hadoop web interface port 50070 and 8088

Install Hive

hive home

Initialize hive schema

Start hive metastore service.

hive-site.xml

Hive client

Setup Apache Spark

Spark Home

Jupyter-notebook server

Python 3 Warm Up

Basics

Iterables/Collections

Strings

List

Tuple

Dictionary

Set

Conditional statement

for loop

while loop

Functions and methods

map and filter

map and filter takes function as input

lambda

Python Class

Input and if statement

Input from a file

Output to a file

try except

Python coding exercise

Scala Warm Up

Start Spylon-kernel on Jupyter-notebook

Type of Variable: Mutable or immutable

Block statement

Scala Data Type

Array in Scala

Methods

Functions

Anonymous function

Scala map and filter methods

Class

Objects

Trait

Tuple in Scala

List/Seq

Set in Scala

Scala Map

Scala if statement

Scala for loop

Scala While Loop

Scala Exceptions + try catch finally

Scala coding exercise

Run a program to estimate pi

Common Spark command line

Run Scala code with spark-submit

Python with Apache Spark using Jupyter notebook

Spark Core Introduction

Spark and Scala Version

Basic Spark Package

Resilient Distributed Datasets (RDDs)

RDD Operations

Passing Function to Spark

Printing elements of an RDD

Working with key value pair

RDD Transformation Functions

RDD Action Functions

SPARK SQL

SQL

Datasets and DataFrames

SparkSession

Creating DataFrames

Running SQL Queries Programmatically

Issue from running Cartesian Join Query

Creating Datasets

Interoperating with RDD

Untyped User-Defined Aggregate Functions

Generic Load/Save Functions

Manually specify file option

Run SQL on files directly

Save Mode

Saving to Persistent Tables

Bucketing, Sorting and Partitioning

Apache Arrow

Install Python Arrow Module PyArrow

Issue might happen import PyArrow

Enabling for Conversion to/from Pandas in Python

Connect to any data source the same consistent way

Spark SQL Implementation Example in Scala

Run scala code in Eclipse IDE

Hive Integration, run SQL or HiveQL queries on existing warehouses.

Example: Enrich JSON

Integrate Tableau Data Visualization with Hive Data Warehouse and Apache Spark SQL

Connect Tableau to Spark SQL running in VM with VirtualBox with NAT

Issues with connecting from Tableau to Spark SQL

SPARK Streaming

Discretized Streams (DStreams)

Transformations on DStreams

map(func)

filter(func)

repartition(numPartitions)

union(otherStream)

reduce(func)

count()

countByValue()

reduceByKey(func, [numTasks])

join(otherStream, [numTasks])

cogroup(otherStream, [numTasks])

transform(func)

updateStateByKey(func)

Scala Tips for updateStateByKey

repartition(numPartitions)

DStream Window Operations

DStream Window Transformation

countByWindow(windowLength, slideInterval)

reduceByWindow(func, windowLength, slideInterval)

reduceByKeyAndWindow(func, windowLength, slideInterval, [numTasks])

reduceByKeyAndWindow(func, invFunc, windowLength, slideInterval, [numTasks])

countByValueAndWindow(windowLength, slideInterval, [numTasks])

window(windowLength, slideInterval)

Window DStream print(n)

saveAsTextFiles(prefix, [suffix])

saveAsObjectFiles(prefix, [suffix])

saveAsHadoopFiles(prefix, [suffix])

foreachRDD(func)

Build Twitter Scala API Library for Spark Streaming using sbt

Spark Streaming with Twitter, you can get public tweets by using Twitter API.

Spark streaming use case with Python

Spark Graph Computing

Spark Graph Computing Continue

Graphx

Package org.apache.spark.graphx

Edge Class

EdgeContext Class

EdgeDirection Class

EdgeRDD Class

EdgeTriplet Class

Graph Class

GraphLoader Object

GraphOps Class

GraphXUtils Object

PartitionStrategy Trait

Pregel Object

TripletFields Class

VertexRDD Class

Package org.apache.spark.graphx.impl

AggregatingEdgeContext Class

EdgeRDDImpl Class

Class GraphImpl<VD,ED>

Class VertexRDDImpl<VD>

Package org.apache.spark.graphx.lib

Class ConnectedComponents

Class LabelPropagation

Class PageRank

Class ShortestPaths

Class StronglyConnectedComponents

Class SVDPlusPlus

Class SVDPlusPlus.Conf

Class TriangleCount

Package org.apache.spark.graphx.util

Class BytecodeUtils

Class GraphGenerators

Graphx Example 1

Graphx Example 2

Graphx Example 3

Spark Graphx Describes Organization Chart Easy and Fast

Page Rank with Apache Spark Graphx

bulk synchronous parallel with Google Pregel Graphx Implementation Use Cases

Tree and Graph Traversal with and without Spark Graphx

Graphx Graph Traversal with Pregel Explained

Spark Machine Learning

Binary Classification

Regression

Correlation

Image Data Source

ML DataFrame is SQL DataFrame

ML Transformer

ML Estimator

ML Pipeline

Transformer/Estimator Parameters

Extracting, transforming and selecting features

TF-IDF

Word2Vec

FeatureHasher

Tokenizer

CountVectorizer

StopWordRemover

n-gram

Binarizer

PCA

PolynomialExpansion

StringIndexer

Discrete Cosine Transform (DCT)

One-hot encoding

StandardScaler

IndexToString

VectorIndexer

Interaction

Normalizer

MinMaxScaler

MaxAbScaler

Bucketizer

ElementwiseProduct

SQLTransformer

VectorAssembler

VectorSizeHint

QuantileDiscretizer

Imputer

VectorSlicer

RFormula

ChiSqSelector

Locality Sensitive Hashing

MinHash for Jaccard Distance

Classification and Regression

LogisticRegression

OneVsRest

Naive Bayes classifiers

Decision trees

Random forests

Gradient-boosted trees (GBTs)

Multilayer perceptron classifier

Linear Support Vector Machine

Linear Regression

Generalized linear regression

Isotonic regression

Decision Tree Regression

Random Forest Regression

Gradient-boosted tree regression

Survival regression

Clustering

k-means

Latent Dirichlet allocation or LDA

Bisecting k-means

A Gaussian Mixture Model

Collaborative filtering

Frequent Pattern Mining

FP-Growth

PrefixSpan

ML Tuning: model selection and hyperparameter tuning

Model selection (a.k.a. hyperparameter tuning)

Cross-Validation

Train-Validation Split

Spark Machine Learning Applications

Apache Spark SQL & Machine Learning on Genetic Variant Classifications

Data Visualization with Vegas Viz and Scala with Spark ML

Apache Spark Machine Learning with Dremio Data Lake Engine

Dremio Data Lake Engine Apache Arrow Flight Connector with Spark Machine Learning

Neural Network with Apache Spark Machine Learning Multilayer Perceptron Classifier

Setup TensorFlow, Keras, Theano, Pytorch/torchvision on the CentOS VM

Virus Xray Image Classification with Tensorflow Keras Python and Apache Spark Scala

Appendix -- Video Presentations

References